My goal is, for each PID, to select 2 records with test_sname values of 'want' and 'want2' that occur on the same entry_date. I do this for the first 5 entry_dates that include both test_snames.
This is my query for accomplishing this:
queryBuilder =
"""select PID, test_sname, test_value, units, ref_range, entry_date from labs
where PID=%s and (test_sname='want' or test_sname='want2') and entry_date in
(select entry_date from labs where PID=%s and test_sname in ('want', 'want2')
group by entry_date having count(*) = 2)
order by entry_date limit 10;""" % (pid, pid)
It works as expected when an entry_date has only two rows that contain a test_sname of 'want' or 'want2'.
PID |test_sname |test_value |units |entry_date
10000000 | want | 343 | U/L | 2008-01-01 01:01:01
10000000 | want2 | 984.34 | | 2008-01-01 01:01:01
10000000 | NA1 | 56 | % | 2008-01-01 01:01:01
10000000 | NA2 | 420 | mg/dL | 2008-01-01 01:01:01
10000000 | NA2 | 420 | mg/dL | 2008-01-02 01:01:01
10000000 | want | 343 | U/L | 2008-01-02 01:01:01
10000000 | want2 | 984.34 | | 2008-01-02 01:01:01
10000000 | NA1 | 26 | % | 2008-01-02 01:01:01
10000000 | NA2 | 410 | mg/dL | 2008-01-02 01:01:01
10000000 | NA2 | 455 | mg/dL | 2008-01-02 01:01:01
Results of Query (which are correct):
PID |test_sname |test_value |units |entry_date
10000000 | want | 343 | U/L | 2008-01-01 01:01:01
10000000 | want2 | 984.34 | | 2008-01-01 01:01:01
10000000 | want | 343 | U/L | 2008-01-02 01:01:01
10000000 | want2 | 984.34 | | 2008-01-02 01:01:01
The problem comes when, for instance, there are multiple rows from the test_sname of 'want' on the same entry_date, because the having count(*) = 2 is no longer valid. There are no results for data like this.
PID |test_sname |test_value |units |entry_date
11111111 | want | 343 | U/L | 2009-10-26 07:25:00
11111111 | want2 | 984.34 | | 2009-10-26 07:25:00
11111111 | want | 189 | U/L | 2009-10-26 07:25:00
11111111 | NA1 | 50 | % | 2009-10-26 07:25:00
11111111 | NA2 | 40 | mg/dL | 2009-10-26 07:25:00
11111111 | NA3 | 84.55 | | 2009-10-26 07:25:00
11111111 | NA4 | 4.5 | thou/uL | 2009-10-26 07:25:00
11111111 | NA5 | 14.6 | g/dL | 2009-10-26 07:25:00
11111111 | NA6 | 0.96 | mg/dL | 2009-10-26 07:25:00
11111111 | want | 343 | U/L | 2009-10-30 07:25:00
11111111 | want2 | 984.34 | | 2009-10-30 07:25:00
11111111 | want | 189 | U/L | 2009-10-30 07:25:00
11111111 | NA1 | 6 | % | 2009-10-30 07:25:00
11111111 | NA2 | 40 | mg/dL | 2009-10-30 07:25:00
11111111 | NA3 | 84.55 | | 2009-10-30 07:25:00
11111111 | NA4 | 4.5 | thou/uL | 2009-10-30 07:25:00
11111111 | NA5 | 14.6 | g/dL | 2009-10-30 07:25:00
11111111 | NA6 | 0.96 | mg/dL | 2009-10-30 07:25:00
As a restriction, I tried putting a limit 2 in the subquery (I know that by itself that won't fix the problem), but it gave this error, and I thought I had the most updated version of SQL, so apparently I can't use limit in the subquery.
This version of MySQL doesn't yet support 'LIMIT & IN/ALL/ANY/SOME subquery'
I realize there are multiple ways to fix this - I could select ALL the values and then programmatically take what I need with Python, but I'm looking for a mySQL query solution written using the Python mySQL-connector. I wouldn't complain about a python solution though.
I am using python v3.4.4 with mySQL-connector v2.1.3 and MySQL server v5.7.11
Thanks for your time!