I can convert a string representation of a list to a list with ast.literal_eval. Is there an equivalent for a numpy array?
x = arange(4)
xs = str(x)
xs
'[0 1 2 3]'
# how do I convert xs back to an array
Using ast.literal_eval(xs) raises a SyntaxError. I can do the string parsing if I need to, but I thought there might be a better solution.
For 1D arrays, Numpy has a function called fromstring, so it can be done very efficiently without extra libraries.
Briefly you can parse your string like this:
s = '[0 1 2 3]'
a = np.fromstring(s[1:-1], dtype=np.int, sep=' ')
print(a) # [0 1 2 3]
For nD arrays, one can use .replace() to remove the brackets and .reshape() to reshape to desired shape, or use Merlin's solution.
Try this:
xs = '[0 1 2 3]'
import re, ast
ls = re.sub('\s+', ',', xs)
a = np.array(ast.literal_eval(ls))
a # -> array([0, 1, 2, 3])
np.fromstring, a function I'd forgotten about, for the problem I was trying to solve. I also said "I can do the string parsing if I need to" in my question. So I didn't learn anything from your answer, but I learned something from the other one.
Use np.matrix to convert a string to a numpy matrix. Then, use np.asarray to convert the matrix to a numpy array with the same shape.
>>> s = "[1,2]; [3,4]"
>>> a = np.asarray(np.matrix(s))
>>> a
array([[1, 2],
[3, 4]])
In contrast to the accepted answer, this works also for two dimensional arrays.
if elements of lists are 2D float. ast.literal_eval() cannot handle a lot very complex list of list of nested list.
Therefore, it is better to parse list of list as dict and dump the string.
while loading a saved dump, ast.literal_eval() handles dict as strings in a better way. convert the string to dict and then dict to list of list
k = np.array([[[0.09898942, 0.22804536],[0.06109612, 0.19022354],[0.93369348, 0.53521671],[0.64630094, 0.28553219]],[[0.94503154, 0.82639528],[0.07503319, 0.80149062],[0.1234832 , 0.44657691],[0.7781163 , 0.63538195]]])
d = dict(enumerate(k.flatten(), 1))
d = str(d) ## dump as string (pickle and other packages parse the dump as bytes)
m = ast.literal_eval(d) ### convert the dict as str to dict
m = np.fromiter(m.values(), dtype=float) ## convert m to nparray
reprthat can be used to reconstruct even a python list. You could doctor the string to recreate a list then create a numpy array from that e.g.numpy.array(ast.literal_eval(', '.join(xs.split(' '))))ast.literal_eval? If so, then the answer is no, you can't get a numpy array fromliteral_eval. From the python documentation ofast.literal_eval(node_or_string): "The string or node provided may only consist of the following Python literal structures: strings, numbers, tuples, lists, dicts, booleans, and None." If what you really want is a convenient way to convert a numpy array to a string and then back to an array, please elaborate on that in the question.ast.literal_evalthat worked for numpy arrays, but didn't expect to useast.literal_eval.